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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907989.1_cds_XP_016458113.1_51772
CDS Infomation

[gene=LOC107781837] [db_xref=GeneID:107781837] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016458113.1] [location=join(2283..3060,8183..8203,8403..8435,8539..9641)] [gbkey=CDS]
Sequence

ATGATGTTGGGAAGACGACTCTGGATTGCTACTCTTGTAATCTGCATAACCATTGTCAAA
GCCCAAAATGTTACTCACTGTTCTTCTTCTTGCGGTGATATTCATAACATCAGTTTTCCT
TTTCGATTGAAAGCTGATCCCCACGACTGTGGAGATTCCAGGTTCGAGCTCGATTGCCAG
AACAACCGTACTGTCATAAGTTTGGGTACTCTCATAGGTTCGGACGCAGGAATATATAAC
GTGCTAGAAATCAACTATGATAATTTCATTATCAGAGCAATTGACCCTGGTGTGGAGCAT
CAAATTAGTAGGAACTGCACTACTTCTCCTAATAACTTCCACATGTTTGCTCCCACCGCC
CCAGCTTTTTCCAGTACTGATTCGAGCAGTCCCATTCTTTACGTCAATTGTTTATCCACT
GCAAATTCTTCCAGCTATGTGGAGACTACTTTCTGTGGTTCACAGAACAAGACTACTTCT
TCTTCTTCTCAGAGTCATAGCTATCTCACCGTTGGACAGGACATGACAATTTCGGATTTG
GCAGAGAATTGCAGCGTTGAAATGGTTGCCTGGACTTCGGCTAGGGGGCTTTCAGCGGAC
AATAATTCTCTATCGAGCATTAATGCGGCTCTGACAGATGGGTTTGAGCTTTCTTGGAAA
CGTGCCTTACTGTGCAGAGAATGTGACGTGAGAGGAGCCTTCTGTTTTGAAGACGACGGT
TATAGATGCAGCAACCCCTGCTATAGCTACTATGTGATGGAGAGAATTCCCCTCCCTTGT
CGCCTCTCCCACAATGGTGTTCTTACAACAATATACGTTGGAAGTGTTACATTTTCAATT
CTGTCATTGCGCTTTCTCTTTGGATTGGTTTTCCTGATTGCATTAGTTGTGCATAAATGG
AGAAGACGACACTTATCTATGTACCAATCAATTGAAGACTTCCTGCAAATCCAGAGCAAC
CTTGTGCCAATTAAGTATTCCTATTCTGAGATTAAGAAGATGACTAATAAATTCAAGGAA
AAACTAGGCGAAGGAGCCTATGGAACTGTCTTTAAAGGAAAGCTCCGTAGTGGTCCTTTT
GTTGCAGTGAAGATGATGCACAAATCTATGACTAGTGGCCAAGAATTTATCAGTGAAGTT
TCCACAATTGGAAGGATTCATCATGTTAATGTTGTGCAGCTCATTGGATTCTGTGTTGAG
GGCTCGAAACGTGCTTTGGTATATGACTTCATGCCTAATGGTTCCTTGGACAAGTACATA
TTCCAGCAAGAAGGAACTATTTCCTTGAGTTACAAACAAATGTTCGATATATCTCTTGGA
GTGGCCCGTGGGGTAGAATACCTACATCGGGGCTGTGACATGCAGATCTTACATTTTGAT
ATTAAGCCACATAACATTCTTCTTGACGAAAATTTCGGCCCCAAAATATCTGACTTTGGG
CTTGCCAAATTGTATCCAACAGATGATAGTATAGTGAGTCTAACTGCAGCAAGAGGGACA
ATGGGTTACATGGCTCCTGAGTTGTTTTATAAAAATATTGGAGGAATCTCATACAAAGCC
GATGTATATAGTTATGGCATGTTGTTGATGGAAATGGCAGGCAGAAGGAAGAACATGAAC
CCATTTGACGACCACTTAAGCCAGATTTACTTTCCTACCTGGGTTTATGACCAATTTAAT
GAAGGAAATGATATAGAGATACATGATACCACCGATGAAGAAAGGAGGATGGTAAAGAGG
ATGATAATTGTGGCGTTGTGGTGCATACAGATGAAGCCAGCTGATCGTCCTGCAATGAAC
AAAGTTGTTGAAATGCTTGAAGGAGATGATGAACTCCTACAGATGCCCCCAAGACCTTTT
ATAGCTCCCCGTGAGATTAATGCTGGAGATGTTATTGAGACAATAAGAATATCCAGTGAC
ATTCTAGGTTGTTAA

Peptide Sequence

PEP ID

XP_016458113.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MMLGRRLWIATLVICITIVKAQNVTHCSSSCGDIHNISFPFRLKADPHDCGDSRFELDCQ
NNRTVISLGTLIGSDAGIYNVLEINYDNFIIRAIDPGVEHQISRNCTTSPNNFHMFAPTA
PAFSSTDSSSPILYVNCLSTANSSSYVETTFCGSQNKTTSSSSQSHSYLTVGQDMTISDL
AENCSVEMVAWTSARGLSADNNSLSSINAALTDGFELSWKRALLCRECDVRGAFCFEDDG
YRCSNPCYSYYVMERIPLPCRLSHNGVLTTIYVGSVTFSILSLRFLFGLVFLIALVVHKW
RRRHLSMYQSIEDFLQIQSNLVPIKYSYSEIKKMTNKFKEKLGEGAYGTVFKGKLRSGPF
VAVKMMHKSMTSGQEFISEVSTIGRIHHVNVVQLIGFCVEGSKRALVYDFMPNGSLDKYI
FQQEGTISLSYKQMFDISLGVARGVEYLHRGCDMQILHFDIKPHNILLDENFGPKISDFG
LAKLYPTDDSIVSLTAARGTMGYMAPELFYKNIGGISYKADVYSYGMLLMEMAGRRKNMN
PFDDHLSQIYFPTWVYDQFNEGNDIEIHDTTDEERRMVKRMIIVALWCIQMKPADRPAMN
KVVEMLEGDDELLQMPPRPFIAPREINAGDVIETIRISSDILGC

Transcript Sequence

Gene sequence data has not been registered.